STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001393annotation not available (330 aa)    
Predicted Functional Partners:
CSMD3
CUB and Sushi multiple domains 3.
    
 0.874
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.789
CUL7
Cullin 7.
    
 0.781
ENSPCAP00000014868
annotation not available
   
 0.772
WDR18
WD repeat domain 18.
   
 0.765
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.758
TEX10
Testis expressed 10.
   
 0.751
MYL10
Myosin light chain 10.
   
 0.746
MYL2
Myosin light chain 2.
   
 0.746
MYL6B
Myosin light chain 6B.
    
 0.741
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.