STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARX1BARX homeobox 1. (177 aa)    
Predicted Functional Partners:
FOXI1
Forkhead box I1.
    
 0.554
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
     
 0.552
ISL2
ISL LIM homeobox 2.
   
 
 0.517
ISL1
ISL LIM homeobox 1.
   
 
 0.517
LHX6
LIM homeobox 6.
    
 
 0.503
SFRP2
Secreted frizzled related protein 2.
   
 
 0.498
OSR2
Odd-skipped related transciption factor 2.
    
 0.478
CAPN3
Calpain 3.
   
 
  0.468
CAPN9
Calpain 9.
   
 
  0.468
ALX3
ALX homeobox 3.
   
 
 0.463
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.