STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001397annotation not available (328 aa)    
Predicted Functional Partners:
RBP3
Retinol binding protein 3.
   
  
 0.913
XRCC6
X-ray repair cross complementing 6.
    
 
 0.695
APP
Amyloid beta precursor protein.
    
 0.611
VTN
Vitronectin.
    
 
 0.560
APLP2
Amyloid beta precursor like protein 2.
    
 0.554
APLP1
Amyloid beta precursor like protein 1.
    
 0.552
PODXL2
Podocalyxin like 2.
    
 0.552
C6
Complement C6.
   
 0.545
C7
Complement C7.
   
 0.545
ENSPCAP00000012679
annotation not available
   
 0.542
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.