STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HARS1histidyl-tRNA synthetase 1. (505 aa)    
Predicted Functional Partners:
HARS2
histidyl-tRNA synthetase 2, mitochondrial.
   
  0.998
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.948
MARS1
methionyl-tRNA synthetase 1.
  
 
 0.901
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.895
EIF2AK4
Eukaryotic translation initiation factor 2 alpha kinase 4.
     
 0.860
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.857
PSMD14
Proteasome 26S subunit, non-ATPase 14.
  
 
 0.840
EIF2D
Eukaryotic translation initiation factor 2D.
    
 
 0.821
LARS1
leucyl-tRNA synthetase 1.
  
 
 0.817
DARS2
aspartyl-tRNA synthetase 2, mitochondrial.
  
  
 0.817
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.