ENSPCAP00000001412 protein (Procavia capensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Gene Fusion

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Co-expression

Experiments

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[Homology]

Score

ENSPCAP00000001412

annotation not available (594 aa)

Predicted Functional Partners:

MED13

0.998

MED19

0.998

MED31

0.998

MED14

0.998

MED20

0.998

ENSPCAP00000004885

0.998

MED30

0.998

MED18

0.998

MED23

0.998

MED15

0.998

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000001412	ENSPCAP00000004885	ENSPCAP00000001412	ENSPCAP00000004885	annotation not available	annotation not available	0.998
ENSPCAP00000001412	MED13	ENSPCAP00000001412	ENSPCAP00000000408	annotation not available	Mediator complex subunit 13.	0.998
ENSPCAP00000001412	MED14	ENSPCAP00000001412	ENSPCAP00000003535	annotation not available	Mediator complex subunit 14.	0.998
ENSPCAP00000001412	MED15	ENSPCAP00000001412	ENSPCAP00000007207	annotation not available	Mediator complex subunit 15.	0.998
ENSPCAP00000001412	MED18	ENSPCAP00000001412	ENSPCAP00000005884	annotation not available	Mediator complex subunit 18.	0.998
ENSPCAP00000001412	MED19	ENSPCAP00000001412	ENSPCAP00000001149	annotation not available	Mediator complex subunit 19.	0.998
ENSPCAP00000001412	MED20	ENSPCAP00000001412	ENSPCAP00000004226	annotation not available	Mediator complex subunit 20.	0.998
ENSPCAP00000001412	MED23	ENSPCAP00000001412	ENSPCAP00000006529	annotation not available	Mediator complex subunit 23.	0.998
ENSPCAP00000001412	MED30	ENSPCAP00000001412	ENSPCAP00000005069	annotation not available	Mediator complex subunit 30.	0.998
ENSPCAP00000001412	MED31	ENSPCAP00000001412	ENSPCAP00000003504	annotation not available	Mediator complex subunit 31.	0.998
ENSPCAP00000004885	ENSPCAP00000001412	ENSPCAP00000004885	ENSPCAP00000001412	annotation not available	annotation not available	0.998
ENSPCAP00000004885	MED13	ENSPCAP00000004885	ENSPCAP00000000408	annotation not available	Mediator complex subunit 13.	0.997
ENSPCAP00000004885	MED14	ENSPCAP00000004885	ENSPCAP00000003535	annotation not available	Mediator complex subunit 14.	0.998
ENSPCAP00000004885	MED15	ENSPCAP00000004885	ENSPCAP00000007207	annotation not available	Mediator complex subunit 15.	0.997
ENSPCAP00000004885	MED18	ENSPCAP00000004885	ENSPCAP00000005884	annotation not available	Mediator complex subunit 18.	0.998
ENSPCAP00000004885	MED19	ENSPCAP00000004885	ENSPCAP00000001149	annotation not available	Mediator complex subunit 19.	0.997
ENSPCAP00000004885	MED20	ENSPCAP00000004885	ENSPCAP00000004226	annotation not available	Mediator complex subunit 20.	0.998
ENSPCAP00000004885	MED23	ENSPCAP00000004885	ENSPCAP00000006529	annotation not available	Mediator complex subunit 23.	0.998
ENSPCAP00000004885	MED30	ENSPCAP00000004885	ENSPCAP00000005069	annotation not available	Mediator complex subunit 30.	0.998
ENSPCAP00000004885	MED31	ENSPCAP00000004885	ENSPCAP00000003504	annotation not available	Mediator complex subunit 31.	0.998