Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM7Zinc finger SWIM-type containing 7. (114 aa)    
Predicted Functional Partners:
SPIDR
Scaffold protein involved in DNA repair.
    
   0.951
ZSWIM3
Zinc finger SWIM-type containing 3.
   
  
 0.777
RAB33B
RAB33B, member RAS oncogene family.
    
   0.695
MCMDC2
Minichromosome maintenance domain containing 2.
      
 0.674
FKBPL
FKBP prolyl isomerase like.
   
  
 0.655
ENSPCAP00000003471
annotation not available
      
 0.647
ENSPCAP00000009351
annotation not available
      
 0.622
STAG3
Stromal antigen 3.
      
 0.621
MBOAT1
Membrane bound O-acyltransferase domain containing 1.
      
 0.610
PSMC3IP
PSMC3 interacting protein.
   
  
 0.606
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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