STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001427annotation not available (956 aa)    
Predicted Functional Partners:
ENSPCAP00000001851
annotation not available
    
 
 0.983
CDK9
Cyclin dependent kinase 9.
    
 0.938
FUBP1
Far upstream element binding protein 1.
   
 
 0.917
ENSPCAP00000010168
annotation not available
    
 0.848
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 0.837
RUVBL2
RuvB like AAA ATPase 2.
    
 0.836
YEATS4
YEATS domain containing 4.
    
 0.833
BRD2
Bromodomain containing 2.
    
 
 0.828
RUVBL1
RuvB like AAA ATPase 1.
    
 0.825
TAF2
TATA-box binding protein associated factor 2.
    
 0.821
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.