STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC6Tetratricopeptide repeat domain 6. (617 aa)    
Predicted Functional Partners:
HCFC2
Host cell factor C2.
   
 0.907
HCFC1
Host cell factor C1.
   
 0.907
UCHL5
Ubiquitin C-terminal hydrolase L5.
    
 0.830
BAP1
BRCA1 associated protein 1.
    
 0.830
MCRS1
Microspherule protein 1.
     
 0.783
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.777
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.766
TEX30
Testis expressed 30.
    
 0.766
DNAAF4
Dynein axonemal assembly factor 4.
  
 0.761
POMGNT2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
     
 0.715
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.