STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOA1Apolipoprotein A1. (263 aa)    
Predicted Functional Partners:
ENSPCAP00000014695
annotation not available
   
 0.933
APOB
Apolipoprotein B.
   
 0.895
ABCA1
ATP binding cassette subfamily A member 1.
     
 0.891
PLA2G15
Phospholipase A2 group XV.
   
 0.834
APOA2
Apolipoprotein A2.
   
 
 0.794
ABCA2
ATP binding cassette subfamily A member 2.
     
 0.729
APOC3
Apolipoprotein C3.
   
 
 0.726
PLTP
Phospholipid transfer protein.
     
 0.713
ABCA4
ATP binding cassette subfamily A member 4.
     
 0.695
APOC2
Apolipoprotein C2.
   
 
 0.626
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.