STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGRNAgrin. (1802 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
   
 0.995
MUSK
Muscle associated receptor tyrosine kinase.
    
 0.991
LRP4
LDL receptor related protein 4.
    
 0.989
TMPRSS15
Transmembrane serine protease 15.
    
 
 0.913
LRP2
LDL receptor related protein 2.
    
 0.908
NUDCD1
NudC domain containing 1.
    
   0.894
RAPSN
Receptor associated protein of the synapse.
      
 0.854
NID2
Nidogen 2.
   
 0.851
NID1
Nidogen 1.
   
 0.829
VEGFA
Vascular endothelial growth factor A.
    
 0.811
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.