Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001447annotation not available (1374 aa)    
Predicted Functional Partners:
ENSPCAP00000003997
annotation not available
   
 0.995
VDAC1
Voltage dependent anion channel 1.
   
 
 0.913
PTCD3
Pentatricopeptide repeat domain 3.
   
 
 0.886
ENSPCAP00000002074
annotation not available
    
 
 0.885
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
    
 
 0.872
MRPL58
Mitochondrial ribosomal protein L58.
    
 
 0.871
MAP1S
Microtubule associated protein 1S.
    
 
 0.862
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.857
NUP205
Nucleoporin 205.
   
  
 0.854
ENSPCAP00000004535
annotation not available
    
 0.821
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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