STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMIM7Small integral membrane protein 7. (72 aa)    
Predicted Functional Partners:
ENSPCAP00000005398
annotation not available
   
 0.972
COG3
Component of oligomeric golgi complex 3.
   
 0.967
ENSPCAP00000006033
annotation not available
   
 0.964
ENSPCAP00000009886
annotation not available
   
 0.964
COG7
Component of oligomeric golgi complex 7.
   
 0.963
ENSPCAP00000012226
annotation not available
   
 0.963
COG5
Component of oligomeric golgi complex 5.
   
 0.957
CASC4
Cancer susceptibility 4.
      
 0.912
TPX2
TPX2 microtubule nucleation factor.
   
 0.902
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
     
 0.880
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.