STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPY19L4Dpy-19 like 4. (675 aa)    
Predicted Functional Partners:
TSR3
TSR3 ribosome maturation factor.
      
 0.506
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
  
 0.473
CCNQ
Cyclin Q.
      
 0.472
CASC1
Cancer susceptibility 1.
   
    0.434
HABP4
Hyaluronan binding protein 4.
      
 0.426
CCDC126
Coiled-coil domain containing 126.
      
 0.426
NOC4L
Nucleolar complex associated 4 homolog.
      
 0.426
ENSPCAP00000000071
annotation not available
      
 0.422
SLC45A1
Solute carrier family 45 member 1.
      
 0.420
ASB17
Ankyrin repeat and SOCS box containing 17.
   
  
 0.414
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.