STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS9D1VPS9 domain containing 1. (627 aa)    
Predicted Functional Partners:
ENSPCAP00000014054
annotation not available
      
 0.525
PNO1
Partner of NOB1 homolog.
      
 0.525
ZNF276
Zinc finger protein 276.
      
 0.524
POLR3A
RNA polymerase III subunit A.
      
 0.522
CDHR3
Cadherin related family member 3.
      
 0.495
DND1
DND microRNA-mediated repression inhibitor 1.
      
 0.491
ENSPCAP00000003981
annotation not available
      
 0.433
NAV3
Neuron navigator 3.
    
   0.432
ENSPCAP00000013345
annotation not available
    
   0.432
ENSPCAP00000005651
annotation not available
      
 0.430
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.