STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOC3Apolipoprotein C3. (114 aa)    
Predicted Functional Partners:
APOA2
Apolipoprotein A2.
   
 
 0.968
APOB
Apolipoprotein B.
   
 
 0.957
APOC2
Apolipoprotein C2.
   
 
 0.956
ENSPCAP00000009812
annotation not available
   
 
 0.929
FABP1
Fatty acid binding protein 1.
   
 
 0.926
APOH
Apolipoprotein H.
   
  
 0.833
APOA5
Apolipoprotein A5.
   
 
 0.830
AMBP
Alpha-1-microglobulin/bikunin precursor.
   
  
 0.797
F2
Coagulation factor II, thrombin.
   
 
 0.790
AHSG
Alpha 2-HS glycoprotein.
   
 
 0.780
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.