STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC2HC1CZinc finger C2HC-type containing 1C. (459 aa)    
Predicted Functional Partners:
ENSPCAP00000007162
annotation not available
     
 0.973
RBM25
RNA binding motif protein 25.
   
 
 0.894
CDC5L
Cell division cycle 5 like.
   
   0.874
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
    
 
 0.870
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
   0.811
PRPF39
pre-mRNA processing factor 39.
    
 
 0.755
SF3B2
Splicing factor 3b subunit 2.
    
 
 0.745
ENSPCAP00000010409
annotation not available
    
 
 0.743
RNF20
Ring finger protein 20.
   
 0.742
RNF40
Ring finger protein 40.
   
 0.742
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.