STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPGN-methylpurine DNA glycosylase. (284 aa)    
Predicted Functional Partners:
ELP1
Elongator complex protein 1.
    
   0.954
ELP2
Elongator acetyltransferase complex subunit 2.
    
   0.922
ELP3
Elongator acetyltransferase complex subunit 3.
    
   0.899
MBD4
methyl-CpG binding domain 4, DNA glycosylase.
    
 
 0.896
APEX1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
    
 0.790
HSD17B14
Hydroxysteroid 17-beta dehydrogenase 14.
   
   0.786
POLB
DNA polymerase beta.
     
 0.728
KBTBD4
Kelch repeat and BTB domain containing 4.
    
   0.717
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
      
 0.689
LIG1
DNA ligase 1.
      
 0.613
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.