STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001480annotation not available (641 aa)    
Predicted Functional Partners:
AAR2
AAR2 splicing factor.
    
 
 0.952
PRPF8
pre-mRNA processing factor 8.
    
 
 0.912
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 
 0.905
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.708
ASCC3
Activating signal cointegrator 1 complex subunit 3.
   
 
 0.678
EAPP
E2F associated phosphoprotein.
    
   0.677
ENSPCAP00000004163
annotation not available
   
 
 0.672
ZNHIT2
Zinc finger HIT-type containing 2.
    
 
 0.668
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
 
 0.643
PIH1D1
PIH1 domain containing 1.
    
 
 0.618
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.