STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT2Zinc finger matrin-type 2. (199 aa)    
Predicted Functional Partners:
MFAP1
Microfibril associated protein 1.
   
 0.997
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.993
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 
 0.989
PRPF6
pre-mRNA processing factor 6.
   
 0.988
PRPF38A
pre-mRNA processing factor 38A.
   
 0.986
PRPF31
pre-mRNA processing factor 31.
   
 0.973
TCERG1
Transcription elongation regulator 1.
    
  0.970
TCERG1L
Transcription elongation regulator 1 like.
    
  0.968
ENSPCAP00000010294
annotation not available
   
 0.968
TXNL4A
Thioredoxin like 4A.
    
 0.965
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.