Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL6A6Collagen type VI alpha 6 chain. (2241 aa)    
Predicted Functional Partners:
ENSPCAP00000006712
annotation not available
   
 0.971
ENSPCAP00000007645
annotation not available
   
 0.950
ENSPCAP00000010063
annotation not available
   
 
 0.942
ITGA9
Integrin subunit alpha 9.
    
 0.939
ITGA6
Integrin subunit alpha 6.
    
 0.913
ITGB8
Integrin subunit beta 8.
    
 0.913
ITGA1
Integrin subunit alpha 1.
    
 0.896
COL6A3
Collagen type VI alpha 3 chain.
     
  0.895
VWA2
Von Willebrand factor A domain containing 2.
     
  0.895
ITGA8
Integrin subunit alpha 8.
    
 0.893
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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