Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM38ATransmembrane protein 38A. (299 aa)    
Predicted Functional Partners:
DOK2
Docking protein 2.
    
   0.912
PCP2
Purkinje cell protein 2.
    
   0.730
NCEH1
Neutral cholesterol ester hydrolase 1.
   
   0.712
KLHL31
Kelch like family member 31.
   
  
 0.693
RHBDD1
Rhomboid domain containing 1.
      
 0.692
RYR1
Ryanodine receptor 1.
   
  
 0.646
PLPP7
Phospholipid phosphatase 7 (inactive).
   
  
 0.645
RPL3L
Ribosomal protein L3 like.
   
  
 0.640
ANKRD23
Ankyrin repeat domain 23.
   
  
 0.630
LRRC20
Leucine rich repeat containing 20.
   
 
 0.621
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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