STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH1Cadherin 1. (901 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.996
JUP
Junction plakoglobin.
   
 0.993
CTNND1
Catenin delta 1.
   
 0.992
MDM2
MDM2 proto-oncogene.
    
 0.962
ARVCF
ARVCF delta catenin family member.
   
 0.944
VCL
Vinculin.
   
 0.938
CTNNA3
Catenin alpha 3.
    
 0.933
CTNNA2
Catenin alpha 2.
    
 0.933
ENSPCAP00000014575
annotation not available
    
 0.933
CDHR2
Cadherin related family member 2.
    
 0.925
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.