STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH1Cadherin 1. (901 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.989
JUP
Junction plakoglobin.
   
 0.986
CTNND1
Catenin delta 1.
    
 0.975
CTNNA3
Catenin alpha 3.
    
 0.946
ENSPCAP00000014575
annotation not available
    
 0.946
CTNNA2
Catenin alpha 2.
    
 0.940
RAPGEF1
Rap guanine nucleotide exchange factor 1.
     
 0.885
ARVCF
ARVCF delta catenin family member.
    
 0.865
ENSPCAP00000006949
annotation not available
    
 0.832
ENSPCAP00000014175
annotation not available
    
 0.832
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.