Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLB1Galactosidase beta 1. (664 aa)    
Predicted Functional Partners:
NEU1
Neuraminidase 1.
  
 0.998
CTSA
Cathepsin A.
   
 0.990
NAGA
alpha-N-acetylgalactosaminidase.
  
 
 0.967
GUSB
Glucuronidase beta.
  
 0.966
GLA
Galactosidase alpha.
  
 
 0.960
GALNS
Galactosamine (N-acetyl)-6-sulfatase.
   
 0.957
ARSA
Arylsulfatase A.
  
 0.938
GNS
Glucosamine (N-acetyl)-6-sulfatase.
  
 0.913
GBA2
Glucosylceramidase beta 2.
     
 0.912
TRAPPC1
Trafficking protein particle complex 1.
    
   0.911
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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