Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUDPPseudouridine 5'-phosphatase. (207 aa)    
Predicted Functional Partners:
PGM3
Phosphoglucomutase 3.
   
 0.930
ENSPCAP00000010198
annotation not available
  
 0.898
FLAD1
Flavin adenine dinucleotide synthetase 1.
    
 0.893
ENSPCAP00000000815
annotation not available
  
 
 0.890
ENSPCAP00000015757
annotation not available
  
 0.879
ENSPCAP00000000954
annotation not available
    
 0.869
MRTFA
Myocardin related transcription factor A.
   
 0.865
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.856
CPPED1
Calcineurin like phosphoesterase domain containing 1.
  
 
 0.837
ACP5
Acid phosphatase 5, tartrate resistant.
    
 0.835
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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