STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RARARetinoic acid receptor alpha. (626 aa)    
Predicted Functional Partners:
PML
Promyelocytic leukemia.
    
 0.971
RXRB
Retinoid X receptor beta.
   
 0.956
RXRG
Retinoid X receptor gamma.
   
 0.928
ENSPCAP00000014285
annotation not available
   
 0.928
ZBTB16
Zinc finger and BTB domain containing 16.
    
 0.915
NCOR1
Nuclear receptor corepressor 1.
    
 0.885
MED1
Mediator complex subunit 1.
    
  0.884
NCOR2
Nuclear receptor corepressor 2.
    
 0.863
SPI1
Spi-1 proto-oncogene.
    
 0.860
NCOA1
Nuclear receptor coactivator 1.
    
 0.848
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.