Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRT19Keratin 19. (398 aa)    
Predicted Functional Partners:
KRT8
Keratin 8.
   
 0.999
CAV3
Caveolin 3.
     
 0.903
SNTA1
Syntrophin alpha 1.
     
 0.901
DAG1
Dystroglycan 1.
     
 0.899
SNTB1
Syntrophin beta 1.
     
  0.897
SGCD
Sarcoglycan delta.
     
  0.897
SNTB2
Syntrophin beta 2.
     
  0.897
ENSPCAP00000006818
annotation not available
     
 0.897
SGCE
Sarcoglycan epsilon.
     
  0.897
SGCG
Sarcoglycan gamma.
     
  0.883
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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