PTGES protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Experiments

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[Homology]

Score

PTGES

Prostaglandin E synthase. (110 aa)

Predicted Functional Partners:

PTGES3

0.981

PTGES2

0.954

PTGS2

0.942

PTGS1

0.937

HPGD

0.937

ENSPCAP00000007819

0.929

ENSPCAP00000007303

0.923

PRXL2B

0.913

ENSPCAP00000005448

0.906

HPGDS

0.903

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPCAP00000005448	ENSPCAP00000007303	ENSPCAP00000005448	ENSPCAP00000007303	annotation not available	annotation not available	0.903
ENSPCAP00000005448	ENSPCAP00000007819	ENSPCAP00000005448	ENSPCAP00000007819	annotation not available	annotation not available	0.915
ENSPCAP00000005448	HPGDS	ENSPCAP00000005448	ENSPCAP00000008461	annotation not available	Hematopoietic prostaglandin D synthase.	0.956
ENSPCAP00000005448	PRXL2B	ENSPCAP00000005448	ENSPCAP00000008468	annotation not available	Peroxiredoxin like 2B.	0.866
ENSPCAP00000005448	PTGES	ENSPCAP00000005448	ENSPCAP00000001543	annotation not available	Prostaglandin E synthase.	0.906
ENSPCAP00000005448	PTGES2	ENSPCAP00000005448	ENSPCAP00000010867	annotation not available	Prostaglandin E synthase 2.	0.903
ENSPCAP00000005448	PTGES3	ENSPCAP00000005448	ENSPCAP00000007262	annotation not available	Prostaglandin E synthase 3.	0.891
ENSPCAP00000005448	PTGS1	ENSPCAP00000005448	ENSPCAP00000012333	annotation not available	Prostaglandin-endoperoxide synthase 1.	0.894
ENSPCAP00000005448	PTGS2	ENSPCAP00000005448	ENSPCAP00000000707	annotation not available	Prostaglandin-endoperoxide synthase 2.	0.884
ENSPCAP00000007303	ENSPCAP00000005448	ENSPCAP00000007303	ENSPCAP00000005448	annotation not available	annotation not available	0.903
ENSPCAP00000007303	ENSPCAP00000007819	ENSPCAP00000007303	ENSPCAP00000007819	annotation not available	annotation not available	0.937
ENSPCAP00000007303	HPGD	ENSPCAP00000007303	ENSPCAP00000012552	annotation not available	15-hydroxyprostaglandin dehydrogenase.	0.435
ENSPCAP00000007303	HPGDS	ENSPCAP00000007303	ENSPCAP00000008461	annotation not available	Hematopoietic prostaglandin D synthase.	0.904
ENSPCAP00000007303	PRXL2B	ENSPCAP00000007303	ENSPCAP00000008468	annotation not available	Peroxiredoxin like 2B.	0.867
ENSPCAP00000007303	PTGES	ENSPCAP00000007303	ENSPCAP00000001543	annotation not available	Prostaglandin E synthase.	0.923
ENSPCAP00000007303	PTGES2	ENSPCAP00000007303	ENSPCAP00000010867	annotation not available	Prostaglandin E synthase 2.	0.919
ENSPCAP00000007303	PTGES3	ENSPCAP00000007303	ENSPCAP00000007262	annotation not available	Prostaglandin E synthase 3.	0.905
ENSPCAP00000007303	PTGS1	ENSPCAP00000007303	ENSPCAP00000012333	annotation not available	Prostaglandin-endoperoxide synthase 1.	0.947
ENSPCAP00000007303	PTGS2	ENSPCAP00000007303	ENSPCAP00000000707	annotation not available	Prostaglandin-endoperoxide synthase 2.	0.882
ENSPCAP00000007819	ENSPCAP00000005448	ENSPCAP00000007819	ENSPCAP00000005448	annotation not available	annotation not available	0.915