STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001549annotation not available (353 aa)    
Predicted Functional Partners:
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
 0.986
VCP
Valosin containing protein.
    
 0.975
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
     
 0.946
UBC
Ubiquitin C.
    
 0.945
BECN1
Beclin 1.
    
 0.944
ENSPCAP00000004041
annotation not available
    
 0.943
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 0.923
ATXN2L
Ataxin 2 like.
    
 0.922
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 0.920
ENSPCAP00000013714
annotation not available
    
 0.920
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.