STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001552annotation not available (734 aa)    
Predicted Functional Partners:
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
 0.747
RUBCN
Rubicon autophagy regulator.
    
  0.727
ENSPCAP00000002280
annotation not available
    
 0.695
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 0.671
EXOC4
Exocyst complex component 4.
    
 0.671
COASY
Coenzyme A synthase.
     
 0.654
RAB11FIP3
RAB11 family interacting protein 3.
     
 0.647
MAGED2
MAGE family member D2.
     
 0.638
SLC25A41
Solute carrier family 25 member 41.
      
 0.630
ENSPCAP00000012541
annotation not available
    
 0.627
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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