DRAM1 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

DRAM1

DNA damage regulated autophagy modulator 1. (149 aa)

Predicted Functional Partners:

TTC12

0.769

ENSPCAP00000014385

0.682

DHX40

0.673

PTER

0.673

LRAT

0.635

MEST

0.626

TP53

0.596

MCM5

0.589

ENSPCAP00000003105

0.588

FLVCR1

0.579

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DHX40	DRAM1	ENSPCAP00000006048	ENSPCAP00000001553	DEAH-box helicase 40.	DNA damage regulated autophagy modulator 1.	0.673
DHX40	ENSPCAP00000003105	ENSPCAP00000006048	ENSPCAP00000003105	DEAH-box helicase 40.	annotation not available	0.566
DHX40	ENSPCAP00000014385	ENSPCAP00000006048	ENSPCAP00000014385	DEAH-box helicase 40.	annotation not available	0.555
DHX40	FLVCR1	ENSPCAP00000006048	ENSPCAP00000001473	DEAH-box helicase 40.	Feline leukemia virus subgroup C cellular receptor 1.	0.461
DHX40	LRAT	ENSPCAP00000006048	ENSPCAP00000001176	DEAH-box helicase 40.	Lecithin retinol acyltransferase.	0.584
DHX40	MEST	ENSPCAP00000006048	ENSPCAP00000004710	DEAH-box helicase 40.	Mesoderm specific transcript.	0.441
DHX40	PTER	ENSPCAP00000006048	ENSPCAP00000010102	DEAH-box helicase 40.	Phosphotriesterase related.	0.584
DHX40	TTC12	ENSPCAP00000006048	ENSPCAP00000015261	DEAH-box helicase 40.	Tetratricopeptide repeat domain 12.	0.592
DRAM1	DHX40	ENSPCAP00000001553	ENSPCAP00000006048	DNA damage regulated autophagy modulator 1.	DEAH-box helicase 40.	0.673
DRAM1	ENSPCAP00000003105	ENSPCAP00000001553	ENSPCAP00000003105	DNA damage regulated autophagy modulator 1.	annotation not available	0.588
DRAM1	ENSPCAP00000014385	ENSPCAP00000001553	ENSPCAP00000014385	DNA damage regulated autophagy modulator 1.	annotation not available	0.682
DRAM1	FLVCR1	ENSPCAP00000001553	ENSPCAP00000001473	DNA damage regulated autophagy modulator 1.	Feline leukemia virus subgroup C cellular receptor 1.	0.579
DRAM1	LRAT	ENSPCAP00000001553	ENSPCAP00000001176	DNA damage regulated autophagy modulator 1.	Lecithin retinol acyltransferase.	0.635
DRAM1	MCM5	ENSPCAP00000001553	ENSPCAP00000015652	DNA damage regulated autophagy modulator 1.	Minichromosome maintenance complex component 5.	0.589
DRAM1	MEST	ENSPCAP00000001553	ENSPCAP00000004710	DNA damage regulated autophagy modulator 1.	Mesoderm specific transcript.	0.626
DRAM1	PTER	ENSPCAP00000001553	ENSPCAP00000010102	DNA damage regulated autophagy modulator 1.	Phosphotriesterase related.	0.673
DRAM1	TP53	ENSPCAP00000001553	ENSPCAP00000011892	DNA damage regulated autophagy modulator 1.	Tumor protein p53.	0.596
DRAM1	TTC12	ENSPCAP00000001553	ENSPCAP00000015261	DNA damage regulated autophagy modulator 1.	Tetratricopeptide repeat domain 12.	0.769
ENSPCAP00000003105	DHX40	ENSPCAP00000003105	ENSPCAP00000006048	annotation not available	DEAH-box helicase 40.	0.566
ENSPCAP00000003105	DRAM1	ENSPCAP00000003105	ENSPCAP00000001553	annotation not available	DNA damage regulated autophagy modulator 1.	0.588