STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001562annotation not available (280 aa)    
Predicted Functional Partners:
YDJC
YdjC chitooligosaccharide deacetylase homolog.
  
 
 0.624
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.606
ENSPCAP00000012018
annotation not available
    
  0.584
GALE
UDP-galactose-4-epimerase.
    
 0.582
ENSPCAP00000005459
annotation not available
  
 
 0.579
TMEM130
Transmembrane protein 130.
    
 0.571
CHDH
Choline dehydrogenase.
    
 0.543
IFT46
Intraflagellar transport 46.
    
 0.543
ACHE
Acetylcholinesterase (Cartwright blood group).
   
 
 0.541
GUSB
Glucuronidase beta.
    
 0.537
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.