Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001567annotation not available (277 aa)    
Predicted Functional Partners:
ENSPCAP00000008504
annotation not available
    
   0.898
WDR6
WD repeat domain 6.
      
 0.781
TBL2
Transducin beta like 2.
      
 0.769
MAML1
Mastermind like transcriptional coactivator 1.
   
    0.696
CCDC82
Coiled-coil domain containing 82.
      
 0.692
PTDSS1
Phosphatidylserine synthase 1.
      
 0.623
ENSPCAP00000006607
annotation not available
   
  
 0.602
LRRC2
Leucine rich repeat containing 2.
      
 0.589
TMCO1
Transmembrane and coiled-coil domains 1.
      
 0.589
NAA50
N(alpha)-acetyltransferase 50, NatE catalytic subunit.
      
 0.565
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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