Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GTF2A1General transcription factor IIA subunit 1. (373 aa)    
Predicted Functional Partners:
TBPL1
TATA-box binding protein like 1.
   
 0.998
ENSPCAP00000006093
annotation not available
    
 0.998
ENSPCAP00000008133
annotation not available
    
 0.997
GTF2B
General transcription factor IIB.
   
 0.996
GTF2E1
General transcription factor IIE subunit 1.
    
 0.995
TAF12
TATA-box binding protein associated factor 12.
   
 0.995
TAF5
TATA-box binding protein associated factor 5.
    
 0.994
ENSPCAP00000002648
annotation not available
   
 0.993
TAF4
TATA-box binding protein associated factor 4.
    
 0.993
ENSPCAP00000012604
annotation not available
   
 0.993
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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