STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001574annotation not available (812 aa)    
Predicted Functional Partners:
BUB3
BUB3 mitotic checkpoint protein.
    
 0.654
MAPRE1
Microtubule associated protein RP/EB family member 1.
    
 
 0.644
MAPRE2
Microtubule associated protein RP/EB family member 2.
    
 
 0.644
DNMT3A
DNA methyltransferase 3 alpha.
    
 
 0.644
MAPRE3
Microtubule associated protein RP/EB family member 3.
    
 
 0.644
LGI3
Leucine rich repeat LGI family member 3.
    
 
 0.614
PDCD1
Programmed cell death 1.
  
   
 0.596
CKAP5
Cytoskeleton associated protein 5.
    
 
 0.593
DCTN2
Dynactin subunit 2.
    
 
 0.592
MTOR
Mechanistic target of rapamycin kinase.
   
 0.586
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.