Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001574annotation not available (812 aa)    
Predicted Functional Partners:
LGI3
Leucine rich repeat LGI family member 3.
    
 
 0.726
DCTN2
Dynactin subunit 2.
    
 0.692
KIF2C
Kinesin family member 2C.
    
 0.678
CKAP5
Cytoskeleton associated protein 5.
    
 0.669
TBC1D31
TBC1 domain family member 31.
    
 0.661
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.661
AGTR2
Angiotensin II receptor type 2.
    
 
 0.640
KIF2B
Kinesin family member 2B.
    
 0.640
KIF2A
Kinesin family member 2A.
    
 0.640
ENSPCAP00000000156
annotation not available
    
 0.633
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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