close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRTSerrate, RNA effector molecule. (880 aa)    
Predicted Functional Partners:
NCBP2
Nuclear cap binding protein subunit 2.
    
 0.990
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.990
MTREX
Mtr4 exosome RNA helicase.
   
 0.979
ALYREF
Aly/REF export factor.
   
 0.978
PHAX
Phosphorylated adaptor for RNA export.
   
 0.969
CWC22
CWC22 spliceosome associated protein homolog.
   
 
  0.940
PPIL1
Peptidylprolyl isomerase like 1.
     
 0.930
ENSPCAP00000006811
annotation not available
   
 
  0.928
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 
  0.928
SRRM1
Serine and arginine repetitive matrix 1.
   
 
  0.928
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.