STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHD1Pleckstrin homology and coiled-coil domain containing D1. (355 aa)    
Predicted Functional Partners:
SLC10A1
Solute carrier family 10 member 1.
      
 0.669
ACOT8
acyl-CoA thioesterase 8.
      
 0.572
SLC39A9
Solute carrier family 39 member 9.
      
 0.565
RNF165
Ring finger protein 165.
      
 0.561
NPC2
NPC intracellular cholesterol transporter 2.
   
 
  0.558
ENSPCAP00000011968
annotation not available
      
 0.469
MCF2
MCF.2 cell line derived transforming sequence.
      
 0.462
SLC39A6
Solute carrier family 39 member 6.
      
 0.461
NPC1
NPC intracellular cholesterol transporter 1.
     
  0.446
SCAP
SREBF chaperone.
     
  0.446
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.