STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GHITMGrowth hormone inducible transmembrane protein. (302 aa)    
Predicted Functional Partners:
UQCRC2
Ubiquinol-cytochrome c reductase core protein 2.
   
 
 0.709
BSDC1
BSD domain containing 1.
   
    0.691
TMBIM6
Transmembrane BAX inhibitor motif containing 6.
   
  
 0.647
ENSPCAP00000003490
annotation not available
      
 0.530
LY96
Lymphocyte antigen 96.
      
 0.524
MRE11
MRE11 homolog, double strand break repair nuclease.
      
 0.524
ENSPCAP00000014326
annotation not available
      
 0.524
RPSA
Ribosomal protein SA.
      
 0.515
ITM2C
Integral membrane protein 2C.
      
 0.514
TSPAN18
Tetraspanin 18.
      
 0.501
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.