STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYF5Myogenic factor 5. (255 aa)    
Predicted Functional Partners:
TCF3
Transcription factor 3.
    
 0.874
TCF12
Transcription factor 12.
    
 0.839
TCF4
Transcription factor 4.
    
 0.839
MEF2D
Myocyte enhancer factor 2D.
    
 0.749
EP300
E1A binding protein p300.
    
 
 0.734
TBPL1
TATA-box binding protein like 1.
    
 0.728
MEF2C
Myocyte enhancer factor 2C.
    
 0.717
MEF2A
Myocyte enhancer factor 2A.
    
 0.713
MEF2B
Myocyte enhancer factor 2B.
    
 0.706
ENSPCAP00000010672
annotation not available
    
 
 0.676
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.