Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001593annotation not available (388 aa)    
Predicted Functional Partners:
ENSPCAP00000010631
annotation not available
    
 0.902
LEMD3
LEM domain containing 3.
    
 0.889
EMD
Emerin.
    
 0.863
TMPO
Thymopoietin.
   
 0.775
NUP153
Nucleoporin 153.
    
 
 0.762
RBM23
RNA binding motif protein 23.
    
 0.717
RBM39
RNA binding motif protein 39.
    
 0.717
RASSF8
Ras association domain family member 8.
      
 0.691
ENSPCAP00000014858
annotation not available
    
 0.689
GPR87
G protein-coupled receptor 87.
      
 0.670
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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