STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001593annotation not available (388 aa)    
Predicted Functional Partners:
ENSPCAP00000010631
annotation not available
   
 0.882
EMD
Emerin.
    
 0.841
ENSPCAP00000014858
annotation not available
   
 0.836
LEMD3
LEM domain containing 3.
    
 0.823
TMPO
Thymopoietin.
   
 0.707
RBM23
RNA binding motif protein 23.
    
 0.698
RBM39
RNA binding motif protein 39.
    
 0.698
ENSPCAP00000013382
annotation not available
    
  0.675
SUN3
Sad1 and UNC84 domain containing 3.
    
 0.653
SUN5
Sad1 and UNC84 domain containing 5.
    
 0.649
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.