STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAG1Recombination activating 1. (1044 aa)    
Predicted Functional Partners:
DICER1
Dicer 1, ribonuclease III.
    
 0.951
DROSHA
Drosha ribonuclease III.
    
 0.941
MRPL44
Mitochondrial ribosomal protein L44.
    
 0.941
ENSPCAP00000002524
annotation not available
   
  0.933
EME1
Essential meiotic structure-specific endonuclease 1.
    
 0.932
ENSPCAP00000006625
annotation not available
    
 0.932
MUS81
MUS81 structure-specific endonuclease subunit.
     
 0.932
AGO2
Argonaute RISC catalytic component 2.
     
 0.931
CLP1
Cleavage and polyadenylation factor I subunit 1.
     
  0.930
RPP21
Ribonuclease P/MRP subunit p21.
     
  0.930
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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