close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001601annotation not available (637 aa)    
Predicted Functional Partners:
RPGRIP1
RPGR interacting protein 1.
   
 
 0.620
ENSPCAP00000009864
annotation not available
   
 
 0.587
TTC8
Tetratricopeptide repeat domain 8.
   
  
 0.548
AIPL1
Aryl hydrocarbon receptor interacting protein like 1.
      
 0.527
PRPF38A
pre-mRNA processing factor 38A.
   
  
 0.527
ENSPCAP00000001362
annotation not available
      
 0.526
SPATA17
Spermatogenesis associated 17.
      
 0.525
CEP170B
Centrosomal protein 170B.
      
 0.524
LRAT
Lecithin retinol acyltransferase.
      
 0.523
CEP290
Centrosomal protein 290.
      
 0.505
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.