STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISM1Isthmin 1. (417 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
   
 0.966
SPTSSA
Serine palmitoyltransferase small subunit A.
    
 0.836
KDSR
3-ketodihydrosphingosine reductase.
     
 0.816
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.785
ENSPCAP00000009021
annotation not available
    
 0.741
ENSPCAP00000000954
annotation not available
    
 0.737
ENSPCAP00000013642
annotation not available
   
 0.735
ALAD
Aminolevulinate dehydratase.
    
 0.716
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
    
 0.703
MTOR
Mechanistic target of rapamycin kinase.
    
 0.703
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.