STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001605annotation not available (237 aa)    
Predicted Functional Partners:
ENSPCAP00000006533
annotation not available
     
 0.813
ENSPCAP00000012456
annotation not available
    
 0.811
ATAD1
ATPase family AAA domain containing 1.
     
 0.733
PEX16
Peroxisomal biogenesis factor 16.
     
 0.711
UNC5C
Unc-5 netrin receptor C.
   
  
 0.661
PEX26
Peroxisomal biogenesis factor 26.
     
 0.638
PXMP4
Peroxisomal membrane protein 4.
   
 
 0.632
ACBD5
acyl-CoA binding domain containing 5.
     
 0.624
ACBD4
acyl-CoA binding domain containing 4.
     
 0.624
PEX12
Peroxisomal biogenesis factor 12.
     
 0.614
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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