HR protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HR

HR lysine demethylase and nuclear receptor corepressor. (1173 aa)

Predicted Functional Partners:

PPARG

0.756

ENSPCAP00000004559

0.724

SMARCA4

0.583

SMARCA2

0.583

ARID1A

0.578

ARID1B

0.578

PRKACA

0.573

PRKACB

0.573

SMARCC1

0.564

SMARCC2

0.564

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID1A	ENSPCAP00000004559	ENSPCAP00000011565	ENSPCAP00000004559	AT-rich interaction domain 1A.	annotation not available	0.979
ARID1A	HR	ENSPCAP00000011565	ENSPCAP00000001607	AT-rich interaction domain 1A.	HR lysine demethylase and nuclear receptor corepressor.	0.578
ARID1A	PPARG	ENSPCAP00000011565	ENSPCAP00000000943	AT-rich interaction domain 1A.	Peroxisome proliferator activated receptor gamma.	0.910
ARID1A	SMARCA2	ENSPCAP00000011565	ENSPCAP00000015897	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.964
ARID1A	SMARCA4	ENSPCAP00000011565	ENSPCAP00000013247	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.964
ARID1A	SMARCC1	ENSPCAP00000011565	ENSPCAP00000005196	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.	0.941
ARID1A	SMARCC2	ENSPCAP00000011565	ENSPCAP00000005727	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2.	0.941
ARID1B	ENSPCAP00000004559	ENSPCAP00000012094	ENSPCAP00000004559	AT-rich interaction domain 1B.	annotation not available	0.975
ARID1B	HR	ENSPCAP00000012094	ENSPCAP00000001607	AT-rich interaction domain 1B.	HR lysine demethylase and nuclear receptor corepressor.	0.578
ARID1B	PPARG	ENSPCAP00000012094	ENSPCAP00000000943	AT-rich interaction domain 1B.	Peroxisome proliferator activated receptor gamma.	0.901
ARID1B	SMARCA2	ENSPCAP00000012094	ENSPCAP00000015897	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.946
ARID1B	SMARCA4	ENSPCAP00000012094	ENSPCAP00000013247	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.946
ARID1B	SMARCC1	ENSPCAP00000012094	ENSPCAP00000005196	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.	0.910
ARID1B	SMARCC2	ENSPCAP00000012094	ENSPCAP00000005727	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2.	0.910
ENSPCAP00000004559	ARID1A	ENSPCAP00000004559	ENSPCAP00000011565	annotation not available	AT-rich interaction domain 1A.	0.979
ENSPCAP00000004559	ARID1B	ENSPCAP00000004559	ENSPCAP00000012094	annotation not available	AT-rich interaction domain 1B.	0.975
ENSPCAP00000004559	HR	ENSPCAP00000004559	ENSPCAP00000001607	annotation not available	HR lysine demethylase and nuclear receptor corepressor.	0.724
ENSPCAP00000004559	PPARG	ENSPCAP00000004559	ENSPCAP00000000943	annotation not available	Peroxisome proliferator activated receptor gamma.	0.902
ENSPCAP00000004559	SMARCA2	ENSPCAP00000004559	ENSPCAP00000015897	annotation not available	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.992
ENSPCAP00000004559	SMARCA4	ENSPCAP00000004559	ENSPCAP00000013247	annotation not available	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.992