Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMB3Laminin subunit beta 3. (1166 aa)    
Predicted Functional Partners:
LAMC2
Laminin subunit gamma 2.
   
 0.996
LAMC3
Laminin subunit gamma 3.
   
 0.985
ITGB4
Integrin subunit beta 4.
   
 0.977
LAMA2
Laminin subunit alpha 2.
   
 0.964
LAMA3
Laminin subunit alpha 3.
   
 0.960
LAMA5
Laminin subunit alpha 5.
   
 0.960
ITGA6
Integrin subunit alpha 6.
   
 0.959
NID1
Nidogen 1.
   
 0.957
MEGF9
Multiple EGF like domains 9.
    
  0.946
ITGA11
Integrin subunit alpha 11.
    
 0.944
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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