Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LUC7LLUC7 like. (371 aa)    
Predicted Functional Partners:
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
    
 0.986
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 0.984
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
    
 0.984
PRPF39
pre-mRNA processing factor 39.
   
 0.982
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.982
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.980
ENSPCAP00000010409
annotation not available
   
 0.979
PRPF40B
pre-mRNA processing factor 40 homolog B.
   
 0.979
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.971
PRPF40A
pre-mRNA processing factor 40 homolog A.
   
 0.956
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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