PRMT3 protein (Procavia capensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

PRMT3

Protein arginine methyltransferase 3. (483 aa)

Predicted Functional Partners:

ENSPCAP00000001939

0.998

ENSPCAP00000015792

0.986

PRMT5

0.865

PRMT2

0.863

FBL

0.862

WDR77

0.798

ENSPCAP00000005136

0.791

ERH

0.783

CARM1

0.759

RRP12

0.742

Your Current Organism:

Procavia capensis

NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CARM1	ENSPCAP00000001939	ENSPCAP00000000922	ENSPCAP00000001939	Coactivator associated arginine methyltransferase 1.	annotation not available	0.483
CARM1	ERH	ENSPCAP00000000922	ENSPCAP00000001496	Coactivator associated arginine methyltransferase 1.	ERH mRNA splicing and mitosis factor.	0.419
CARM1	FBL	ENSPCAP00000000922	ENSPCAP00000010748	Coactivator associated arginine methyltransferase 1.	Fibrillarin.	0.429
CARM1	PRMT2	ENSPCAP00000000922	ENSPCAP00000006042	Coactivator associated arginine methyltransferase 1.	Protein arginine methyltransferase 2.	0.619
CARM1	PRMT3	ENSPCAP00000000922	ENSPCAP00000001631	Coactivator associated arginine methyltransferase 1.	Protein arginine methyltransferase 3.	0.759
CARM1	PRMT5	ENSPCAP00000000922	ENSPCAP00000006350	Coactivator associated arginine methyltransferase 1.	Protein arginine methyltransferase 5.	0.892
CARM1	WDR77	ENSPCAP00000000922	ENSPCAP00000010284	Coactivator associated arginine methyltransferase 1.	WD repeat domain 77.	0.452
ENSPCAP00000001939	CARM1	ENSPCAP00000001939	ENSPCAP00000000922	annotation not available	Coactivator associated arginine methyltransferase 1.	0.483
ENSPCAP00000001939	ENSPCAP00000005136	ENSPCAP00000001939	ENSPCAP00000005136	annotation not available	annotation not available	0.899
ENSPCAP00000001939	ENSPCAP00000015792	ENSPCAP00000001939	ENSPCAP00000015792	annotation not available	annotation not available	0.771
ENSPCAP00000001939	FBL	ENSPCAP00000001939	ENSPCAP00000010748	annotation not available	Fibrillarin.	0.953
ENSPCAP00000001939	PRMT2	ENSPCAP00000001939	ENSPCAP00000006042	annotation not available	Protein arginine methyltransferase 2.	0.813
ENSPCAP00000001939	PRMT3	ENSPCAP00000001939	ENSPCAP00000001631	annotation not available	Protein arginine methyltransferase 3.	0.998
ENSPCAP00000001939	RRP12	ENSPCAP00000001939	ENSPCAP00000008459	annotation not available	Ribosomal RNA processing 12 homolog.	0.780
ENSPCAP00000005136	ENSPCAP00000001939	ENSPCAP00000005136	ENSPCAP00000001939	annotation not available	annotation not available	0.899
ENSPCAP00000005136	FBL	ENSPCAP00000005136	ENSPCAP00000010748	annotation not available	Fibrillarin.	0.999
ENSPCAP00000005136	PRMT2	ENSPCAP00000005136	ENSPCAP00000006042	annotation not available	Protein arginine methyltransferase 2.	0.740
ENSPCAP00000005136	PRMT3	ENSPCAP00000005136	ENSPCAP00000001631	annotation not available	Protein arginine methyltransferase 3.	0.791
ENSPCAP00000005136	RRP12	ENSPCAP00000005136	ENSPCAP00000008459	annotation not available	Ribosomal RNA processing 12 homolog.	0.841
ENSPCAP00000005136	WDR77	ENSPCAP00000005136	ENSPCAP00000010284	annotation not available	WD repeat domain 77.	0.422