STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFAP1L1Actin filament associated protein 1 like 1. (767 aa)    
Predicted Functional Partners:
GADD45G
Growth arrest and DNA damage inducible gamma.
    
   0.953
VPS53
VPS53 subunit of GARP complex.
      
 0.775
RPH3AL
Rabphilin 3A like (without C2 domains).
      
 0.692
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.692
SYT10
Synaptotagmin 10.
      
 0.692
PTOV1
PTOV1 extended AT-hook containing adaptor protein.
    
   0.684
ENSPCAP00000002862
annotation not available
   
    0.632
CNTN6
Contactin 6.
      
 0.588
GRPEL2
GrpE like 2, mitochondrial.
      
 0.588
PCYOX1L
Prenylcysteine oxidase 1 like.
      
 0.588
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.