STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
REEP4Receptor accessory protein 4. (257 aa)    
Predicted Functional Partners:
REEP1
Receptor accessory protein 1.
    
 
 0.953
REEP2
Receptor accessory protein 2.
    
 
 0.938
ENSPCAP00000015264
annotation not available
      
 0.874
ATL1
Atlastin GTPase 1.
    
 
 0.820
ATL3
Atlastin GTPase 3.
    
 
 0.778
C2CD2
C2 calcium dependent domain containing 2.
      
 0.769
RTN3
Reticulon 3.
   
 
 0.740
REEP3
Receptor accessory protein 3.
    
   0.713
B4GALT3
Beta-1,4-galactosyltransferase 3.
    
   0.710
ENSPCAP00000000482
annotation not available
      
 0.692
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.