STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP4Receptor accessory protein 4. (257 aa)    
Predicted Functional Partners:
REEP2
Receptor accessory protein 2.
  
 
 
0.621
REEP1
Receptor accessory protein 1.
  
 
  
0.613
ATL1
Atlastin GTPase 1.
    
 
 0.607
ATL3
Atlastin GTPase 3.
    
 
 0.570
ENSPCAP00000005490
annotation not available
   
 
 0.521
NEMP1
Nuclear envelope integral membrane protein 1.
      
 0.520
CCDC150
Coiled-coil domain containing 150.
      
 0.513
ENSPCAP00000014868
annotation not available
    
 
 0.461
CEP85
Centrosomal protein 85.
      
 0.457
CCDC34
Coiled-coil domain containing 34.
   
  
 0.446
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.