STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001642annotation not available (542 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
    
 0.879
TFIP11
Tuftelin interacting protein 11.
    
 0.870
PPIL1
Peptidylprolyl isomerase like 1.
    
  0.730
DHX32
DEAH-box helicase 32 (putative).
    
 0.714
DQX1
DEAQ-box RNA dependent ATPase 1.
    
 0.714
CDC40
Cell division cycle 40.
     
 0.701
DDX23
DEAD-box helicase 23.
    
  0.683
PRPF8
pre-mRNA processing factor 8.
    
   0.663
PRPF6
pre-mRNA processing factor 6.
    
   0.643
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
   0.635
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.