Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCAP00000001642annotation not available (542 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
   
 0.996
TFIP11
Tuftelin interacting protein 11.
   
 0.993
CCDC12
Coiled-coil domain containing 12.
    
  0.989
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
  0.984
XAB2
XPA binding protein 2.
   
  0.984
CWF19L2
CWF19 like cell cycle control factor 2.
   
  0.984
CDC40
Cell division cycle 40.
    
 0.977
CWF19L1
CWF19 like cell cycle control factor 1.
    
  0.976
PRPF8
pre-mRNA processing factor 8.
    
  0.969
PPIL1
Peptidylprolyl isomerase like 1.
    
  0.968
Your Current Organism:
Procavia capensis
NCBI taxonomy Id: 9813
Other names: Cape hyrax, Cape rock hyrax, P. capensis, large-toothed rock hyrax, rock dassie, rock hyrax
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